University of Basel
Prof. Dr. Volker Roth
Department of Mathematics
and Computer Science
CH - 4051 Basel, Switzerland
Phone: + 41 61 207 0549
Fax: + 41 61 207 0559
You can find scripts developed in our group on the BMDA GitHub repository.
This software aims at reconstructing haplotypes from next-generation sequencing data.
A typical application example is to reconstruct HIV-1 haplotypes present in a blood sample from a patient based on a set of reads.
PredictHaplo is free software. The text file COPYING, included in the package, contains copyright and licensing details. PredictHaplo has been tested and used with gcc version on linux platforms.